Preface |
General Concepts / I: |
The Role of Modeling in Systems Biology / Douglas B. Kell ; Joshua D. Knowles1: |
Complexity and Robustness of Cellular Systems / Jorg Stelling ; Uwe Sauer ; Francis J. Doyle III ; John Doyle2: |
On Modules and Modularity / Zoltan Szallasi ; Vipul Periwal3: |
Modeling Approaches / II: |
Bayesian Inference of Biological Systems: The Logic of Biology / 4: |
Stoichiometric and Constraint-based Modeling / Steffen Klamt5: |
Modeling Molecular Interaction Networks with Nonlinear Ordinary Differential Equations / Emery D. Conrad ; John J. Tyson6: |
Qualitative Approaches to the Analysis of Genetic Regulatory Networks / Hidde de Jong ; Delphine Ropers7: |
Stochastic Modeling of Intracellular Kinetics / Johan Paulsson ; Johan Elf8: |
Kinetics in Spatially Extended Systems / Karsten Kruse9: |
Models And Reality / III: |
Biological Data Acquisition for System Level Modeling-An Exercise in the Art of Compromise / 10: |
Methods to Identify Cellular Architecture and Dynamics from Experimental Data / Rudiyanto Gunawan ; Kapil G. Gadker11: |
Using Control Theory to Study Biology / Brian P. Ingalls ; Tau-Mi Yi ; Pablo A. Iglesias12: |
Synthetic Gene Regulatory Systems / Mads Kaern ; Ron Weiss13: |
Multilevel Modeling in Systems Biology: From Cells to Whole Organs / Denis Noble14: |
Computational Modeling / IV: |
Computational Constraints on Modeling in Systems Biology / 15: |
Numerical Simulation for Biochemical Kinetics / Daniel T. Gillespie ; Linda R. Petzold16: |
Software Infrastructure for Effective Communication and Reuse of Computational Models / Andrew Finney ; Michael Hucka ; Benjamin J. Bornstein ; Sarah M. Keating ; Bruce E. Shapiro ; Joanne Matthews ; Ben L. Kovitz ; Maria J. Schilstra ; Akira Funahashi ; Hiroaki Kitano17: |
A Software Tools for Biological Modeling |
References |
Contributors |
Index |
Preface |
General Concepts / I: |
The Role of Modeling in Systems Biology / Douglas B. Kell ; Joshua D. Knowles1: |
Complexity and Robustness of Cellular Systems / Jorg Stelling ; Uwe Sauer ; Francis J. Doyle III ; John Doyle2: |
On Modules and Modularity / Zoltan Szallasi ; Vipul Periwal3: |
Modeling Approaches / II: |