Preface |
About the Authors |
Study Aids |
Microbial activity / Section I: |
The world of microbes / Chapter 1: |
Introduction |
What is a microbe? |
Having a long past |
Being small |
Being many |
Growing and persisting |
Colonizing every niche and making Earth inhabitable |
Shaping the planet |
Making a living |
Cooperating for complex endeavors |
Conclusions |
Study questions |
Structure and function / Section II: |
Prokaryotic cell structure and function: envelopes and appendages / Chapter 2: |
Prokaryotic cells |
Microscopes |
Prokaryotes have complex envelopes and appendages |
The cell membrane |
How the cell membrane is protected |
Capsules, flagella, and pili: how prokaryotes cope in certain environments |
Prokaryotic cell structure and function: the cell interior / Chapter 3: |
General observations |
The nucleoid |
The cytoplasm |
Inclusions and vesicles |
Growth / Section III: |
Growth of microbial populations / Chapter 4: |
How to measure growth of a bacterial culture |
When should the growth rate be determined? |
The law of growth |
Balanced growth |
Continuous culture |
How is the physiology of the cells affected by the growth rate? |
Effects of temperature, hydrostatic pressure, osmotic strength, and pH |
Making a cell / Chapter 5: |
Growth metabolism: making life from nonlife |
Framework of growth metabolism |
Global effects of growth metabolism |
Summary and plan |
Fueling / Chapter 6: |
Overview of fueling reactions |
Getting energy and reducing power |
Making precursor metabolites: heterotrophy |
Making precursor metabolites: autotrophy |
Summary |
Biosynthesis / Chapter 7: |
Some general observations |
Assimilation of nitrogen |
Assimilation of sulfur |
Assimilation of phosphorus |
Pathways to building blocks |
Building macromolecules / Chapter 8: |
DNA |
RNA |
Protein |
Envelope formation |
Concluding remarks |
The cell division cycle / Chapter 9: |
Strategies for studying the bacterial cell cycle |
DNA replication during the cell cycle |
How is DNA replication regulated? |
Cell division |
The connection between cell division and DNA replication |
Cell division and plasmid replication |
The prokaryotic equivalent of mitosis |
Inheritance / Section IV: |
Genetics / Chapter 10: |
Exchange of DNA among prokaryotes |
Mutation and sources of genetic variation among prokaryotes |
Genomics |
Evolution / Chapter 11: |
Overview |
Sequence of bases in macromolecules |
The universal ancestor |
Origin of life |
Mechanisms of bacterial evolution |
Early eukaryotes and endosymbiosis |
Evolution of molecules |
Physiology / Section V: |
Coordination and regulation / Chapter 12: |
Evidence for coordination of metabolic reactions |
Two modes of regulation |
Modulation of protein activity |
Modulation of protein amounts |
Cooperative interaction of regulatory devices |
Summary and conclusions: networks for coordination and response |
Succeeding in the environment / Chapter 13: |
Microbes in their habitat |
Coping with stress as individual cells |
Coping with stress by community effort |
Differentiation and development / Chapter 14: |
Endospores |
Development of Caulobacter crescentus |
Development of myxobacteria |
Other bacteria that undergo differentiation and development |
Diversity / Section VI: |
Prokaryotic microbes / Chapter 15: |
Making order of prokaryotic diversity |
Prokaryotic species |
Extent of prokaryotic diversity |
Higher taxa of prokaryotes |
Archaea |
Bacteria |
Eukaryotic microbes / Chapter 16: |
Fungi |
Protists |
Viruses, viroids, and prions / Chapter 17: |
Size and shape |
Ecology and classification |
Viral replication |
Lysogeny and integration into the host genome |
Viroids and prions |
Interactions / Section VII: |
Ecology / Chapter 18: |
Methods of microbial ecology |
Biogeochemical cycles |
Solid substrates |
Microbial ecosystems |
The future of microbial ecology |
Symbiosis, predation, and antibiosis / Chapter 19: |
Symbiosis |
Behavioral changes due to parasitism |
Predation |
Antibiotics and bacteriocins |
Infection: the vertebrate host / Chapter 20: |
Host defenses |
Infection: the microbe / Chapter 21: |
Case reports |
Microbes and human history / Chapter 22: |
How infectious diseases change |
Microbial agents of warfare |
Coping with danger in a microbial world |
Conclusion |
Suggested reading |
Putting microbes to work / Chapter 23: |
Various uses of microbes |
Making better wines: the malolactic fermentation |
Protecting plants and making snow: ice-minus bacteria |
Using microbes to make protein drugs: insulin and human growth hormone (hGH) |
Microbial enzymes: sweeteners from corn |
Biological insecticides: Bt |
Undoing pollution: bioremediation |
Coda |
Glossary |
Answers to Study Questions |
Figure and Table Credits |
Index |